[1]
|
Lanata, C.F., Fischer-Walker, C.L., Olascoaga, A.C., Torres, C.X., Aryee, M.J., et al. (2013) Global Causes of Diarrheal Disease Mortality in Children, 5 Years of Age: A Systematic Review. PLOS ONE, 8, e72788.
https://doi.org/10.1371/journal.pone.0072788
|
[2]
|
Introduction of Rotavirus Vaccine.
https://immunizationdata.who.int/pages/vaccine-intro-by-antigen/rotavirus.html?ISO_3_CODE=&YEAR=
|
[3]
|
Greenberg, H.B. and Estes, M.K. (2009) Rotaviruses: From Pathogenesis to Vaccination. Gastroenterology, 136, 1939- 1951. https://doi.org/10.1053/j.gastro.2009.02.076
|
[4]
|
Arias, C.F., Silva-Ayala, D. and López, S. (2015) Rota-virus Entry: A Deep Journey into the Cell with Several Exits. Journal of Virology, 89, 890-893. https://doi.org/10.1128/JVI.01787-14
|
[5]
|
López, S. and Arias, C.F. (2004) Multistep Entry of Rotavirus into Cells: A Versaillesque Dance. Trends in Microbiology, 12, 271-278. https://doi.org/10.1016/j.tim.2004.04.003
|
[6]
|
Sánchez-San Martín, C., López, T., Arias, C.F. and López, S. (2004) Characterization of Rotavirus Cell Entry. Journal of Virology, 78, 2310-2318. https://doi.org/10.1128/JVI.78.5.2310-2318.2004
|
[7]
|
Dóró, R., László, B., Martella, V., Leshem, E., Gentsch, J., et al. (2014) Review of Global Rotavirus Strain Prevalence Data from Six Years Post Vaccine Licensure Surveillance: Is There Evidence of Strain Selection from Vaccine Pressure? Infection, Genetics and Evolution, 28, 446-461. https://doi.org/10.1016/j.meegid.2014.08.017
|
[8]
|
Sen, A. and Greenberg, H.B. (2016) Innate Immune Responses Torotavirus Infection. In: Svensson, L. et al., Eds., Viral Gastroenteritis, Academic Press, Cambridge, MA, 243-263.
https://doi.org/10.1016/B978-0-12-802241-2.00012-2
|
[9]
|
Bishop, R.F., Davidson, G.P., Holmes, I.H. and Ruck, B.J. (1973) Virus Particles in Epithelial Cells of Duodenal Mucosa from Children with Viral Gastroenteritis. The Lancet, 302, 1281-1283.
https://doi.org/10.1016/S0140-6736(73)92867-5
|
[10]
|
Liu, Z., Smith, H., et al. (2023) Rotavirus-Mediated DGAT1 Degradation: A Pathophysiological Mechanism of Viral-Induced Malabsorptive Diarrhea. Proceedings of the National Academy of Sciences of the United States of America, 120, e2302161120. https://doi.org/10.1073/pnas.2302161120
|
[11]
|
Hagbom, M., Sharma, S., Lundgren, O. and Svensson, L., (2012) Towards a Human Rotavirus Disease Model. Current Opinion in Virology, 2, 408-418. https://doi.org/10.1016/j.coviro.2012.05.006
|
[12]
|
Ousingsawat, J., et al. (2011) Rotavirus Toxin NSP4 Induces Diarrhea by Activation of TMEM16A and Inhibition of Na+ Absorption. Pflügers Archiv, 461, 579-589. https://doi.org/10.1007/s00424-011-0947-0
|
[13]
|
Viskovska, M., Anish, R., Hu, L., et al. (2014) Probing the Sites of Interactions of Rotaviral Proteins Involved in Replication. Journal of Virology, 88, 12866-12881. https://doi.org/10.1128/JVI.02251-14
|
[14]
|
Ingle, H., Peterson, S. and Baldridge, M. (2018) Distinct Effects of Type I and III Interferons on Enteric Viruses. Viruses, 10, Article 46. https://doi.org/10.3390/v10010046
|
[15]
|
Chen, S., Li, P., Wang, Y., Yin, Y., et al. (2020) Rotavirus Infection and Cytopathogenesis in Human Biliary Organoids Poten-tially Recapitulate Biliary Atresia Development. mBio, 11, e1000280. https://doi.org/10.1128/mBio.01968-20
|
[16]
|
Neil, J.A., Matsuzawa-Ishimoto, Y., Kernbauer-Hölzl, E., et al. (2019) IFN-I and IL-22 Mediate Protective Effects of Intestinal Viral Infection. Nature Microbiology, 4, 1737-1749. https://doi.org/10.1038/s41564-019-0470-1
|
[17]
|
Pervolaraki, K., Rastgou Talemi, S., Albrecht, D., Bormann, F., et al. (2018) Differential Induction of Interferon Stimulated Genes between Type I and Type III Interferons Is Independent of Interferon Receptor Abundance. PLOS Pathogens, 14, e1007420. https://doi.org/10.1371/journal.ppat.1007420
|
[18]
|
Nolan, L.S. and Baldridge, M.T. (2022) Advances in Under-standing Interferon-Mediated Immune Responses to Enteric Viruses in Intestinal Organoids. Frontiers in Immunology, 13, Article 943334.
https://doi.org/10.3389/fimmu.2022.943334
|
[19]
|
Doldan, P., Dai, J., Metz-Zumaran, C., Patton, J.T., et al. (2022) Type III and Not Type I Interferons Efficiently Prevent the Spread of Rotavirus in Human Intestinal Epithelial Cells. Journal of Virology, 96, e0070622.
https://doi.org/10.1128/jvi.00706-22
|
[20]
|
Seth, R.B., Sun, L., Ea, C.K., et al. (2005) Identification and Characteri-zation of MAVS, a Mitochondrial Antiviral Signaling Protein That Activates NF-KappaB and IRF3. Cell, 122, 669-682. https://doi.org/10.1016/j.cell.2005.08.012
|
[21]
|
Li, Y., Yu, P., et al. (2020) MDA5 against Enteric Viruses through Induction of Interferon-Like Response Partially via the JAK-STAT Cascade. Antiviral Research, 176, Article 104743. https://doi.org/10.1016/j.antiviral.2020.104743
|
[22]
|
Roundtree, I.A., Evans, M.E., Pan, T. and He, C. (2017) Dy-namic RNA Modifications in Gene Expression Regulation. Cell, 169, 1187-1200. https://doi.org/10.1016/j.cell.2017.05.045
|
[23]
|
Wang, A., Tao, W., et al. (2022) M6A Modifications Regulate In-testinal Immunity and Rotavirus Infection. eLife, 11, e73628. https://doi.org/10.7554/eLife.73628
|
[24]
|
Pang, Z., et al. (2022) Interferon-Inducible Transmembrane Protein 3 (IFITM3) Restricts Rotavirus Infection. Viruses, 14, Article 2407. https://doi.org/10.3390/v14112407
|
[25]
|
Xue, Y., Enosi, T.D., Tan, W.H., Kay, C. and Man, S.M. (2019) Emerging Activators and Regulators of Inflammasomes and Pyroptosis. Trends in Immunology, 40, 1035-1052. https://doi.org/10.1016/j.it.2019.09.005
|
[26]
|
Lamkanfi, M. and Dixit, V.M. (2012) Inflammasomes and Their Roles in Health and Disease. Annual Review of Cell and Developmental Biology, 28, 137-161. https://doi.org/10.1146/annurev-cellbio-101011-155745
|
[27]
|
Mullins, B. and Chen, J. (2020) NLRP9 in Innate Immunity and Inflammation. Immunology, 162, 262-267.
https://doi.org/10.1111/imm.13290
|
[28]
|
Dong, X., Wang, Y., et al. (2023) Sodium Butyrate Protects against Rota-virus-Induced Intestinal Epithelial Barrier Damage by Activating AMPK-Nrf2 Signaling Pathway in IPEC-J2 Cells. In-ternational Journal of Biological Macromolecules, 228, 186-196. https://doi.org/10.1016/j.ijbiomac.2022.12.219
|
[29]
|
Kanai, Y., Komoto, S., Kawagishi, T., Nouda, R., Nagasawa, N., et al. (2017) Entirely Plasmid-Based Reverse Genetics System for Rotaviruses. Proceedings of the National Academy of Sciences of the United States of America, 114, 2349-2354. https://doi.org/10.1073/pnas.1618424114
|
[30]
|
McDonald, S.M. and Patton, J.T. (2011) Rotavirus VP2 Core Shell Regions Critical for Viral Polymerase Activation. Journal of Virology, 85, 3095-3105. https://doi.org/10.1128/JVI.02360-10
|
[31]
|
Steger, C.L., Boudreaux, C.E., LaConte, L.E., et al. (2019) Group A Rotavirus VP1 Polymerase and VP2 Core Shell Proteins: Intergenotypic Sequence Variation and in Vitro Functional Compatibility. Journal of Virology, 93, e01642-18.
https://doi.org/10.1128/JVI.01642-18
|
[32]
|
Steger, C.L., Brown, M.L., Sullivan, O.M., et al. (2019) In Vitro Dou-ble-Stranded RNA Synthesis by Rotavirus Polymerase Mutants with Lesions at Core Shell Contact Sites. Journal of Vi-rology, 93, e01049-19.
https://doi.org/10.1128/JVI.01049-19
|
[33]
|
Kumar, D., Yu, X., Crawford, S.E., et al. (2020) 2.7 Å Cryo-EM Structure of Rotavirus Core Protein VP3, a Unique Capping Machine with a Helicase Activity. Science Advances, 6, eaay6410. https://doi.org/10.1126/sciadv.aay6410
|
[34]
|
Song, Y., et al. (2020) Reverse Genetics Reveals a Role of the Rotavirus VP3 Phosphodiesterase Activity in Inhibiting RNase L Signaling and Contributing to Intestinal Viral Rep-lication in Vivo. Journal of Virology, 94, e01952-19.
https://doi.org/10.1128/JVI.01952-19
|
[35]
|
Dai, J., Agbemabiese, C.A., Griffin, A.N. and Patton, J.T. (2023) Rota-virus Capping Enzyme VP3 Inhibits Interferon Expression by Inducing MAVS Degradation during Viral Replication. mBio, 14, e0225523.
https://doi.org/10.1128/mbio.02255-23
|
[36]
|
Hu, C.T., Diaz, K., Yang, L.C., Sharma, A., et al. (2022) VP4 Is a Determinant of Alpha-Defensin Modulation of Rotaviral Infection. Journal of Virology, 96, e0205321. https://doi.org/10.1128/jvi.02053-21
|
[37]
|
Holly, M.K., Diaz, K. and Smith, J.G. (2017) Defensins in Viral Infec-tion and Pathogenesis. Annual Review of Virology, 4, 369-391. https://doi.org/10.1146/annurev-virology-101416-041734
|
[38]
|
Yu, S.G., et al. (2020) Amino Acid Substitutions in Positions 385 and 393 of the Hydrophobic Region of VP4 May Be Associated with Rotavirus Attenuation and Cell Cul-ture Adaptation. Viruses, 12, Article 408.
https://doi.org/10.3390/v12040408
|
[39]
|
Estes, M. and Greenberg, H. (2013) Rotaviruses. In: Fields Virology, 6th Edition, Wolters Kluwer Health/Lippincott Williams & Wilkins, Philadelphia, 1347-1401.
|
[40]
|
Buttafuoco, A., Michaelsen, K., Tobler, K., Ackermann, M., et al. (2020) Conserved Rotavirus NSP5 and VP2 Domains Interact and Affect Viroplasm. Journal of Virology, 94, 01965-19. https://doi.org/10.1128/JVI.01965-19
|
[41]
|
Lopez, T., Camacho, M., Zayas, M., et al. (2005) Silencing the Morphogenesis of Rotavirus. Journal of Virology, 79, 184-192. https://doi.org/10.1128/JVI.79.1.184-192.2005
|
[42]
|
Sen, A., Rott, L., Phan, N., et al. (2014) Rotavirus NSP1 Pro-tein Inhibits Interferon-Mediated STAT1 Activation. Journal of Virology, 88, 41-53. https://doi.org/10.1128/JVI.01501-13
|
[43]
|
Holloway, G., Dang, V.T., Jans, D.A. and Coulson, B.S. (2014) Rota-virus Inhibits IFN-Induced STAT Nuclear Translocation by a Mechanism That Acts after STAT Binding to Importin-α. Journal of General Virology, 95, 1723-1733.
https://doi.org/10.1099/vir.0.064063-0
|
[44]
|
Iaconis, G., Jackson, B., Childs, K., Boyce, M., et al. (2021) Rotavirus NSP1 Inhibits Type I and Type III Interferon Induction. Viruses, 13, Article 589. https://doi.org/10.3390/v13040589
|
[45]
|
Bhowmick, R., Halder, U.C., Chattopadhyay, S., et al. (2013) Rota-virus-Encoded Nonstructural Protein 1 Modulates Cellular Apoptotic Machinery by Targeting Tumor Suppressor Protein P53. Journal of Virology, 87, 6840-6850.
https://doi.org/10.1128/JVI.00734-13
|
[46]
|
Geiger, F., Acker, J., et al. (2021) Liquid-Liquid Phase Separation Un-derpins the Formation of Replication Factories in Rotaviruses. The EMBO Journal, 40, e107711. https://doi.org/10.15252/embj.2021107711
|
[47]
|
Criglar, J.M., Hu, L., Crawford, S.E., Hyser, J.M., et al. (2014) A Novel Form of Rotavirus NSP2 and Phosphorylation-Dependent NSP2-NSP5 Interactions Are Associated with Viro-plasm Assembly. Journal of Virology, 88, 786-798.
https://doi.org/10.1128/JVI.03022-13
|
[48]
|
Criglar, J.M., Crawford, S.E., Zhao, B., Smith, H.G., Stossi, F. and Es-tes, M.K. (2020) A Genetically Engineered Rotavirus NSP2 Phosphorylation Mutant Impaired in Viroplasm Formation and Replication Shows an Early Interaction between VNSP2 and Cellular Lipid Droplets. Journal of Virology, 94, e00972-20.
https://doi.org/10.1128/JVI.00972-20
|
[49]
|
Criglar, J.M., et al. (2022) Rotavirus-Induced Lipid Droplet Biogenesis Is Critical for Virus Replication. Frontiers in Physiology, 13, Article 836870. https://doi.org/10.3389/fphys.2022.836870
|
[50]
|
Nichols, S.L., Nilsson, E.M., et al. (2023) Flexibility of the Rota-virus NSP2 C-Terminal Region Supports Factory Formation via Liquid-Liquid Phase Separation. Journal of Virology, 97, e0003923.
https://doi.org/10.1128/jvi.00039-23
|
[51]
|
Liu, C., Huang, P., Zhao, D., et al. (2021) Effects of Rotavirus NSP4 Protein on the Immune Response and Protection of the SR69A-VP8* Nanoparticle Rotavirus Vaccine. Vaccine, 39, 263-271.
https://doi.org/10.1016/j.vaccine.2020.12.005
|
[52]
|
Afchangi, A., Arashkia, A., Shahosseini, Z., et al. (2018) Im-munization of Mice by Rotavirus NSP4-VP6 Fusion Protein Elicited Stronger Responses Compared to VP6 Alone. Viral Immunology, 31, 233-241.
https://doi.org/10.1089/vim.2017.0075
|
[53]
|
Cao, H., Wu, J., Luan, N., Wang, Y., Lin, K. and Liu, C. (2022) Eval-uation of a Bivalent Recombinant Vaccine Candidate Targeting Norovirus and Rotavirus: Antibodies to Rotavirus NSP4 Exert Antidiarrheal Effects without Virus Neutralization. Journal of Medical Virology, 94, 3847-3856. https://doi.org/10.1002/jmv.27809
|
[54]
|
Mahmoud, S., et al. (2022) Opposite Effects of Apoptotic and Necroptotic Cellular Pathways on Rotavirus Replication. Journal of Virology, 96, e0122221. https://doi.org/10.1128/JVI.01222-21
|
[55]
|
Nurdin, J.A., Kotaki, T., et al. (2023) N-Glycosylation of Rotavirus NSP4 Protein Affects Viral Replication and Pathogenesis. Journal of Virology, 97, e0186122. https://doi.org/10.1128/jvi.01861-22
|
[56]
|
Martin, D., Ouldali, M., Menetrey, J. and Poncet, D. (2011) Structural Organisation of the Rotavirus Nonstructural Protein NSP5. Journal of Molecular Biology, 413, 209-221. https://doi.org/10.1016/j.jmb.2011.08.008
|
[57]
|
Sotelo, P.H., Schumann, M., Krause, E. and Chnaiderman, J. (2010) Analysis of Rotavirus Non-Structural Protein NSP5 by Mass Spectrometry Reveals a Complex Phosphorylation Pattern. Virus Research, 149, 104-108.
https://doi.org/10.1016/j.virusres.2009.12.006
|
[58]
|
Yan, Z., et al. (2020) MicroRNA-7 Inhibits Rotavirus Replica-tion by Targeting Viral NSP5 in Vivo and in Vitro. Viruses, 12, Article 209. https://doi.org/10.3390/v12020209
|
[59]
|
Papa, G., et al. (2020) CRISPR-Csy4-Mediated Editing of Rotavirus Dou-ble-Stranded RNA Genome. Cell Reports, 32, Article 108205. https://doi.org/10.1016/j.celrep.2020.108205
|
[60]
|
Sarkar, R., et al. (2021) Rotaviral Nonstructural Protein 5 (NSP5) Promotes Proteasomal Degradation of Up-Frame- shift Protein 1 (UPF1), a Principal Mediator of Nonsense-Mediated MRNA Decay (NMD) Pathway, to Facilitate Infection. Cellular Signalling, 89, Article 110180. https://doi.org/10.1016/j.cellsig.2021.110180
|
[61]
|
Papa, G., Borodavka, A. and Desselberger, U. (2021) Viro-plasms: Assembly and Functions of Rotavirus Replication Factories. Viruses, 13, Article 1349. https://doi.org/10.3390/v13071349
|
[62]
|
Rainsford, E.W. and McCrae, M.A. (2007) Characterization of the NSP6 Protein Product of Rotavirus Gene 11. Virus Research, 130, 193-201. https://doi.org/10.1016/j.virusres.2007.06.011
|
[63]
|
Holloway, G., Johnson, R.I., Kang, Y., Dang, V.T., et al. (2015) Rotavirus NSP6 Localizes to Mitochondria via a Predicted N-Terminalhelix. Journal of General Virology, 96, 3519-3524. https://doi.org/10.1099/jgv.0.000294
|
[64]
|
Komoto, S., Kanai, Y., Fukuda, S., Kugita, M., Kawagishi, T., et al. (2017) Reverse Genetics System Demonstrates That Rotavirus Nonstructural Protein NSP6 Is Not Essential for Viral Replication in Cell Culture. Journal of Virology, 91, e00695-17. https://doi.org/10.1128/JVI.00695-17
|
[65]
|
Fukuda, S., Kugita, M., Higashimoto, Y., Shiogama, K., Tsujikawa, H., Moriguchi, K., et al. (2022) Rotavirus Incapable of NSP6 Expression Can Cause Diarrhea in Suckling Mice. Journal of General Virology, 103.
https://doi.org/10.1099/jgv.0.001745
|